I just did some tests and can confirm the same behaviour.
You need to turn on a setting in the Vegas preferences and then everything should stay in place.
Go to Options/Preferences/General
Turn on
Automatically save trimmer markers and regions with media file
You may also want to
Delete Markers in the future, that have been saved into a particular video.
There is a
right-click menu hiding in the top Marker Region bar.
Regards
Derek
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